Genomic Selection
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01_Genomic_Selection.html
Plant Genetics Data Analysis with R - Baku
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Welcome – Plant Genetics Data Analysis with R
Introduction and Setup
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Welcome and Course Overview
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Setting Up Your Environment: R and RStudio
R Programming Fundamentals
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Module 1.1: Introduction to R - Your Breeding Data Analysis Tool
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Module 1.2: R Data Types and Structures - The Building Blocks
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Module 1.3: Basic Operations in R
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Module 1.4: Reading and Writing Data
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Module 1.5: Why Visualize Your Data?
Handling Breeding Data
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Module 2.1: Loading Breeding Data - ICARDA Barley Example
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Module 2.2: Data Quality Control and Filtering
Core Genomic Concepts
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Module 3.1: Genotype Data
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Module 3.2: Using the QBMS Package to Query Genotypic Data
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Module 3.3: Data Quality Control and Filtering for SNP Data
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Module 3.4: Genetic Diversity
Population Structure and Relatedness
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Module 4.1: Kinship and Relatedness
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Module 4.2: Population Structure
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Module 4.3: Phylogenetic Trees
Genome Wide Association Studies (GWAS)
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Module 6.1: Introduction to GWAS
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Module 6.2:
Single trait GWAS
Genomic Selection
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01_Genomic_Selection.html
Genomic Selection
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01_Genomic_Selection.html
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Module 6.2:
Single trait GWAS